Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chd4Q6PDQ2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd4Q6PDQ2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Gm2495-201ENSMUST00000191160 466 ntBASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd4Q6PDQ2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Gm17795-201ENSMUST00000214505 757 ntBASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Gm19220-201ENSMUST00000222682 803 ntBASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chd4Q6PDQ2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Gm8463-201ENSMUST00000208573 613 ntBASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd4Q6PDQ2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms