Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac4Q6NZM9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac4Q6NZM9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Gm44492-201ENSMUST00000197012 141 ntBASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Gm18206-201ENSMUST00000207027 926 ntBASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.49■□□□□ 0.23
Hdac4Q6NZM9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Gm12260-201ENSMUST00000122447 411 ntBASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Mir8117-201ENSMUST00000184773 107 ntBASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Hdac4Q6NZM9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hdac4Q6NZM9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms