Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Gm12350-201ENSMUST00000121208 462 ntBASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf6Q6NVF9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf6Q6NVF9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf6Q6NVF9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.28□□□□□ -0.12
Cpsf6Q6NVF9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms