Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sp140Q6NSQ5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sp140Q6NSQ5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sp140Q6NSQ5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sp140Q6NSQ5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sp140Q6NSQ5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Gm16198-201ENSMUST00000118766 670 ntBASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sp140Q6NSQ5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sp140Q6NSQ5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sp140Q6NSQ5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sp140Q6NSQ5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sp140Q6NSQ5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sp140Q6NSQ5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms