Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.51■□□□□ 0.07
Scube3Q66PY1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.51■□□□□ 0.07
Scube3Q66PY1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Gm26308-201ENSMUST00000157768 69 ntBASIC15.51■□□□□ 0.07
Scube3Q66PY1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Gm18889-201ENSMUST00000174284 929 ntBASIC15.51■□□□□ 0.07
Scube3Q66PY1 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC15.51■□□□□ 0.07
Scube3Q66PY1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Gm44335-201ENSMUST00000196879 141 ntBASIC15.51■□□□□ 0.07
Scube3Q66PY1 Gm44297-201ENSMUST00000198304 141 ntBASIC15.51■□□□□ 0.07
Scube3Q66PY1 Gm44346-201ENSMUST00000198851 141 ntBASIC15.51■□□□□ 0.07
Scube3Q66PY1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scube3Q66PY1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.5■□□□□ 0.07
Scube3Q66PY1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Auts2-212ENSMUST00000178555 309 ntBASIC15.5■□□□□ 0.07
Scube3Q66PY1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scube3Q66PY1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Gm13464-201ENSMUST00000119418 935 ntBASIC15.49■□□□□ 0.07
Scube3Q66PY1 Gm11543-201ENSMUST00000120758 370 ntBASIC15.49■□□□□ 0.07
Scube3Q66PY1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.49■□□□□ 0.07
Scube3Q66PY1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.49■□□□□ 0.07
Scube3Q66PY1 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.49■□□□□ 0.07
Scube3Q66PY1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Scube3Q66PY1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.49■□□□□ 0.07
Scube3Q66PY1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scube3Q66PY1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scube3Q66PY1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scube3Q66PY1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scube3Q66PY1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Scube3Q66PY1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scube3Q66PY1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Scube3Q66PY1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scube3Q66PY1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scube3Q66PY1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scube3Q66PY1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Scube3Q66PY1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms