Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm24543-201ENSMUST00000103867 82 ntBASIC18.65■□□□□ 0.58
Clcn1Q64347 Gm5566-201ENSMUST00000116118 459 ntBASIC18.65■□□□□ 0.58
Clcn1Q64347 Gm5479-201ENSMUST00000160578 435 ntBASIC18.65■□□□□ 0.58
Clcn1Q64347 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.65■□□□□ 0.58
Clcn1Q64347 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.65■□□□□ 0.58
Clcn1Q64347 Gm27838-201ENSMUST00000184829 128 ntBASIC18.65■□□□□ 0.58
Clcn1Q64347 Gm29667-201ENSMUST00000190817 490 ntBASIC18.65■□□□□ 0.58
Clcn1Q64347 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Clcn1Q64347 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.65■□□□□ 0.58
Clcn1Q64347 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Clcn1Q64347 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.65■□□□□ 0.58
Clcn1Q64347 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.65■□□□□ 0.58
Clcn1Q64347 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn1Q64347 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Clcn1Q64347 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clcn1Q64347 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Clcn1Q64347 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.64■□□□□ 0.58
Clcn1Q64347 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clcn1Q64347 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clcn1Q64347 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn1Q64347 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn1Q64347 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn1Q64347 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.64■□□□□ 0.57
Clcn1Q64347 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.64■□□□□ 0.57
Clcn1Q64347 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn1Q64347 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn1Q64347 Gm9719-201ENSMUST00000162765 543 ntBASIC18.64■□□□□ 0.57
Clcn1Q64347 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.64■□□□□ 0.57
Clcn1Q64347 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn1Q64347 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn1Q64347 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn1Q64347 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.63■□□□□ 0.57
Clcn1Q64347 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Clcn1Q64347 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.63■□□□□ 0.57
Clcn1Q64347 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.63■□□□□ 0.57
Clcn1Q64347 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.63■□□□□ 0.57
Clcn1Q64347 Gm6912-201ENSMUST00000117218 544 ntBASIC18.63■□□□□ 0.57
Clcn1Q64347 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.63■□□□□ 0.57
Clcn1Q64347 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Clcn1Q64347 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Clcn1Q64347 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.63■□□□□ 0.57
Clcn1Q64347 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.63■□□□□ 0.57
Clcn1Q64347 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Clcn1Q64347 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Clcn1Q64347 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn1Q64347 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Clcn1Q64347 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn1Q64347 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn1Q64347 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.62■□□□□ 0.57
Clcn1Q64347 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.62■□□□□ 0.57
Clcn1Q64347 Gm9794-201ENSMUST00000202370 423 ntBASIC18.62■□□□□ 0.57
Clcn1Q64347 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn1Q64347 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Clcn1Q64347 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Clcn1Q64347 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Clcn1Q64347 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn1Q64347 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn1Q64347 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn1Q64347 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn1Q64347 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn1Q64347 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Gm14127-201ENSMUST00000117906 678 ntBASIC18.61■□□□□ 0.57
Clcn1Q64347 Gm12490-201ENSMUST00000120255 560 ntBASIC18.61■□□□□ 0.57
Clcn1Q64347 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Clcn1Q64347 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.61■□□□□ 0.57
Clcn1Q64347 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn1Q64347 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms