Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.44□□□□□ -0.1
Six3Q62233 Gm12008-201ENSMUST00000117791 755 ntBASIC14.44□□□□□ -0.1
Six3Q62233 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.44□□□□□ -0.1
Six3Q62233 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Six3Q62233 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six3Q62233 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Six3Q62233 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.43□□□□□ -0.1
Six3Q62233 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Six3Q62233 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.43□□□□□ -0.1
Six3Q62233 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Six3Q62233 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Six3Q62233 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.43□□□□□ -0.1
Six3Q62233 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Six3Q62233 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.43□□□□□ -0.1
Six3Q62233 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Gm15590-201ENSMUST00000078419 552 ntBASIC14.43□□□□□ -0.1
Six3Q62233 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Six3Q62233 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six3Q62233 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Six3Q62233 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Six3Q62233 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.42□□□□□ -0.1
Six3Q62233 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Six3Q62233 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Six3Q62233 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Six3Q62233 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Gm28659-201ENSMUST00000188013 759 ntBASIC14.42□□□□□ -0.1
Six3Q62233 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Six3Q62233 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Six3Q62233 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Six3Q62233 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Six3Q62233 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six3Q62233 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Six3Q62233 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Mir5131-201ENSMUST00000175426 93 ntBASIC14.41□□□□□ -0.1
Six3Q62233 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Gm27300-201ENSMUST00000184085 97 ntBASIC14.41□□□□□ -0.1
Six3Q62233 Gm27335-201ENSMUST00000184758 97 ntBASIC14.41□□□□□ -0.1
Six3Q62233 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.41□□□□□ -0.1
Six3Q62233 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six3Q62233 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Six3Q62233 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms