Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.71■□□□□ 0.11
Six2Q62232 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.71■□□□□ 0.11
Six2Q62232 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Six2Q62232 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Six2Q62232 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.71■□□□□ 0.11
Six2Q62232 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.71■□□□□ 0.11
Six2Q62232 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Six2Q62232 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Six2Q62232 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.71■□□□□ 0.11
Six2Q62232 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.71■□□□□ 0.11
Six2Q62232 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Gm44492-201ENSMUST00000197012 141 ntBASIC15.71■□□□□ 0.11
Six2Q62232 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.71■□□□□ 0.11
Six2Q62232 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.71■□□□□ 0.11
Six2Q62232 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.71■□□□□ 0.11
Six2Q62232 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Six2Q62232 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.71■□□□□ 0.11
Six2Q62232 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Six2Q62232 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Six2Q62232 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Six2Q62232 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six2Q62232 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Six2Q62232 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Six2Q62232 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Six2Q62232 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.7■□□□□ 0.1
Six2Q62232 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.7■□□□□ 0.1
Six2Q62232 Gm15483-201ENSMUST00000120338 456 ntBASIC15.7■□□□□ 0.1
Six2Q62232 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.7■□□□□ 0.1
Six2Q62232 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.7■□□□□ 0.1
Six2Q62232 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Six2Q62232 Rpph1-201ENSMUST00000175096 319 ntBASIC15.7■□□□□ 0.1
Six2Q62232 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.7■□□□□ 0.1
Six2Q62232 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.7■□□□□ 0.1
Six2Q62232 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.7■□□□□ 0.1
Six2Q62232 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Six2Q62232 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Six2Q62232 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Six2Q62232 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.69■□□□□ 0.1
Six2Q62232 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Six2Q62232 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Six2Q62232 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Six2Q62232 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Gm20553-201ENSMUST00000204205 844 ntBASIC15.69■□□□□ 0.1
Six2Q62232 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.69■□□□□ 0.1
Six2Q62232 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Six2Q62232 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.69■□□□□ 0.1
Six2Q62232 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six2Q62232 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms