Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.1■□□□□ 0.33
Scn9aQ62205 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn9aQ62205 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Gm43179-201ENSMUST00000198797 275 ntBASIC17.09■□□□□ 0.33
Scn9aQ62205 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.09■□□□□ 0.33
Scn9aQ62205 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.09■□□□□ 0.33
Scn9aQ62205 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.09■□□□□ 0.33
Scn9aQ62205 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.09■□□□□ 0.33
Scn9aQ62205 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scn9aQ62205 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn9aQ62205 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn9aQ62205 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn9aQ62205 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.08■□□□□ 0.33
Scn9aQ62205 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Scn9aQ62205 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn9aQ62205 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn9aQ62205 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn9aQ62205 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.08■□□□□ 0.33
Scn9aQ62205 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.08■□□□□ 0.33
Scn9aQ62205 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Scn9aQ62205 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn9aQ62205 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn9aQ62205 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.08■□□□□ 0.33
Scn9aQ62205 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.08■□□□□ 0.32
Scn9aQ62205 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 Gm18827-201ENSMUST00000188341 790 ntBASIC17.08■□□□□ 0.32
Scn9aQ62205 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.08■□□□□ 0.32
Scn9aQ62205 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn9aQ62205 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.07■□□□□ 0.32
Scn9aQ62205 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.07■□□□□ 0.32
Scn9aQ62205 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.07■□□□□ 0.32
Scn9aQ62205 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Scn9aQ62205 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Scn9aQ62205 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Scn9aQ62205 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn9aQ62205 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.06■□□□□ 0.32
Scn9aQ62205 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms