Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.63□□□□□ -0.23
VcanQ62059 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.63□□□□□ -0.23
VcanQ62059 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.63□□□□□ -0.23
VcanQ62059 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.63□□□□□ -0.23
VcanQ62059 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
VcanQ62059 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VcanQ62059 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
VcanQ62059 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Gm45880-201ENSMUST00000213041 853 ntBASIC13.63□□□□□ -0.23
VcanQ62059 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcanQ62059 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.62□□□□□ -0.23
VcanQ62059 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.62□□□□□ -0.23
VcanQ62059 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.62□□□□□ -0.23
VcanQ62059 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
VcanQ62059 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
VcanQ62059 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
VcanQ62059 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.62□□□□□ -0.23
VcanQ62059 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.62□□□□□ -0.23
VcanQ62059 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VcanQ62059 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.62□□□□□ -0.23
VcanQ62059 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.62□□□□□ -0.23
VcanQ62059 Gm22334-201ENSMUST00000158070 133 ntBASIC13.62□□□□□ -0.23
VcanQ62059 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Gm12997-201ENSMUST00000120207 640 ntBASIC13.62□□□□□ -0.23
VcanQ62059 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Gm43758-201ENSMUST00000199500 367 ntBASIC13.62□□□□□ -0.23
VcanQ62059 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcanQ62059 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
VcanQ62059 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VcanQ62059 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Gm22323-201ENSMUST00000103832 109 ntBASIC13.61□□□□□ -0.23
VcanQ62059 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
VcanQ62059 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Gm5523-201ENSMUST00000180415 997 ntBASIC13.61□□□□□ -0.23
VcanQ62059 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
VcanQ62059 Gm7287-201ENSMUST00000205267 602 ntBASIC13.61□□□□□ -0.23
VcanQ62059 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.61□□□□□ -0.23
VcanQ62059 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
VcanQ62059 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.61□□□□□ -0.23
VcanQ62059 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.61□□□□□ -0.23
VcanQ62059 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
VcanQ62059 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.61□□□□□ -0.23
VcanQ62059 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
VcanQ62059 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.6□□□□□ -0.23
VcanQ62059 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.6□□□□□ -0.23
VcanQ62059 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VcanQ62059 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
VcanQ62059 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms