Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.4■□□□□ 0.38
Ctr9Q62018 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.4■□□□□ 0.38
Ctr9Q62018 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ctr9Q62018 Gm15920-201ENSMUST00000118998 402 ntBASIC17.4■□□□□ 0.38
Ctr9Q62018 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.4■□□□□ 0.38
Ctr9Q62018 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
Ctr9Q62018 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctr9Q62018 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.4■□□□□ 0.38
Ctr9Q62018 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.4■□□□□ 0.38
Ctr9Q62018 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.4■□□□□ 0.38
Ctr9Q62018 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctr9Q62018 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.4■□□□□ 0.38
Ctr9Q62018 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ctr9Q62018 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctr9Q62018 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctr9Q62018 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctr9Q62018 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Ctr9Q62018 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctr9Q62018 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctr9Q62018 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.4■□□□□ 0.38
Ctr9Q62018 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ctr9Q62018 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ctr9Q62018 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ctr9Q62018 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ctr9Q62018 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ctr9Q62018 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.39■□□□□ 0.37
Ctr9Q62018 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.39■□□□□ 0.37
Ctr9Q62018 Gm38225-201ENSMUST00000194001 393 ntBASIC17.39■□□□□ 0.37
Ctr9Q62018 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.39■□□□□ 0.37
Ctr9Q62018 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.39■□□□□ 0.37
Ctr9Q62018 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.39■□□□□ 0.37
Ctr9Q62018 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.39■□□□□ 0.37
Ctr9Q62018 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ctr9Q62018 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ctr9Q62018 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ctr9Q62018 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Ctr9Q62018 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ctr9Q62018 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ctr9Q62018 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ctr9Q62018 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.38■□□□□ 0.37
Ctr9Q62018 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.38■□□□□ 0.37
Ctr9Q62018 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.38■□□□□ 0.37
Ctr9Q62018 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.38■□□□□ 0.37
Ctr9Q62018 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ctr9Q62018 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Gm24158-201ENSMUST00000175263 71 ntBASIC17.38■□□□□ 0.37
Ctr9Q62018 Mir6956-201ENSMUST00000183598 62 ntBASIC17.38■□□□□ 0.37
Ctr9Q62018 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.38■□□□□ 0.37
Ctr9Q62018 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.38■□□□□ 0.37
Ctr9Q62018 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.38■□□□□ 0.37
Ctr9Q62018 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ctr9Q62018 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ctr9Q62018 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctr9Q62018 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctr9Q62018 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctr9Q62018 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ctr9Q62018 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Ctr9Q62018 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctr9Q62018 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctr9Q62018 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctr9Q62018 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ctr9Q62018 Gm13464-201ENSMUST00000119418 935 ntBASIC17.37■□□□□ 0.37
Ctr9Q62018 Gm10253-201ENSMUST00000194270 940 ntBASIC17.37■□□□□ 0.37
Ctr9Q62018 Gm7774-201ENSMUST00000200064 533 ntBASIC17.37■□□□□ 0.37
Ctr9Q62018 Gm5779-201ENSMUST00000218467 910 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms