Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gli3Q61602 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gli3Q61602 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gli3Q61602 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gli3Q61602 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gli3Q61602 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gli3Q61602 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gli3Q61602 B9d1os-201ENSMUST00000137010 674 ntBASIC19.53■□□□□ 0.72
Gli3Q61602 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC19.53■□□□□ 0.72
Gli3Q61602 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gli3Q61602 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gli3Q61602 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gli3Q61602 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gli3Q61602 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gli3Q61602 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gli3Q61602 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC19.53■□□□□ 0.72
Gli3Q61602 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC19.53■□□□□ 0.72
Gli3Q61602 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
Gli3Q61602 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gli3Q61602 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gli3Q61602 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Gli3Q61602 Snora73a-201ENSMUST00000082453 205 ntBASIC19.53■□□□□ 0.72
Gli3Q61602 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gli3Q61602 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gli3Q61602 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gli3Q61602 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gli3Q61602 Gm9333-201ENSMUST00000205452 1323 ntBASIC19.52■□□□□ 0.72
Gli3Q61602 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Gli3Q61602 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gli3Q61602 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gli3Q61602 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gli3Q61602 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gli3Q61602 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.52■□□□□ 0.71
Gli3Q61602 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Gli3Q61602 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.51■□□□□ 0.71
Gli3Q61602 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Gli3Q61602 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.51■□□□□ 0.71
Gli3Q61602 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Gli3Q61602 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Gli3Q61602 Gm12485-201ENSMUST00000119641 291 ntBASIC19.51■□□□□ 0.71
Gli3Q61602 Gm14381-201ENSMUST00000122105 414 ntBASIC19.51■□□□□ 0.71
Gli3Q61602 Gm5637-201ENSMUST00000153890 1119 ntBASIC19.51■□□□□ 0.71
Gli3Q61602 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gli3Q61602 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC19.51■□□□□ 0.71
Gli3Q61602 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.51■□□□□ 0.71
Gli3Q61602 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gli3Q61602 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Gli3Q61602 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gli3Q61602 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC19.5■□□□□ 0.71
Gli3Q61602 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Gli3Q61602 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Gli3Q61602 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC19.5■□□□□ 0.71
Gli3Q61602 Gm11658-201ENSMUST00000120913 1008 ntBASIC19.5■□□□□ 0.71
Gli3Q61602 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC19.5■□□□□ 0.71
Gli3Q61602 Gm2467-201ENSMUST00000182266 1010 ntBASIC19.5■□□□□ 0.71
Gli3Q61602 Gm6981-201ENSMUST00000182467 1008 ntBASIC19.5■□□□□ 0.71
Gli3Q61602 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC19.5■□□□□ 0.71
Gli3Q61602 Gm9124-201ENSMUST00000191789 1092 ntBASIC19.5■□□□□ 0.71
Gli3Q61602 Gm9113-201ENSMUST00000192510 1018 ntBASIC19.5■□□□□ 0.71
Gli3Q61602 Gm9131-201ENSMUST00000193557 1089 ntBASIC19.5■□□□□ 0.71
Gli3Q61602 Gm9121-201ENSMUST00000193749 1071 ntBASIC19.5■□□□□ 0.71
Gli3Q61602 AC154462.2-201ENSMUST00000227519 370 ntBASIC19.5■□□□□ 0.71
Gli3Q61602 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC19.5■□□□□ 0.71
Gli3Q61602 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gli3Q61602 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.5■□□□□ 0.71
Gli3Q61602 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gli3Q61602 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC19.49■□□□□ 0.71
Gli3Q61602 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gli3Q61602 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gli3Q61602 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gli3Q61602 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gli3Q61602 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gli3Q61602 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms