Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
Clcn4Q61418 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.62□□□□□ -0.23
Clcn4Q61418 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.62□□□□□ -0.23
Clcn4Q61418 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.62□□□□□ -0.23
Clcn4Q61418 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clcn4Q61418 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn4Q61418 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.61□□□□□ -0.23
Clcn4Q61418 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clcn4Q61418 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.61□□□□□ -0.23
Clcn4Q61418 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.61□□□□□ -0.23
Clcn4Q61418 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Gm15467-201ENSMUST00000120582 445 ntBASIC13.61□□□□□ -0.23
Clcn4Q61418 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.61□□□□□ -0.23
Clcn4Q61418 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.61□□□□□ -0.23
Clcn4Q61418 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.61□□□□□ -0.23
Clcn4Q61418 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.61□□□□□ -0.23
Clcn4Q61418 Gm5264-201ENSMUST00000190584 848 ntBASIC13.61□□□□□ -0.23
Clcn4Q61418 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.61□□□□□ -0.23
Clcn4Q61418 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.61□□□□□ -0.23
Clcn4Q61418 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clcn4Q61418 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clcn4Q61418 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clcn4Q61418 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clcn4Q61418 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn4Q61418 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Clcn4Q61418 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.6□□□□□ -0.23
Clcn4Q61418 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.6□□□□□ -0.23
Clcn4Q61418 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.6□□□□□ -0.23
Clcn4Q61418 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Gm11594-201ENSMUST00000122313 162 ntBASIC13.6□□□□□ -0.23
Clcn4Q61418 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Clcn4Q61418 Gm18489-201ENSMUST00000172565 551 ntBASIC13.6□□□□□ -0.23
Clcn4Q61418 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.6□□□□□ -0.23
Clcn4Q61418 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Clcn4Q61418 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Clcn4Q61418 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.6□□□□□ -0.23
Clcn4Q61418 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.6□□□□□ -0.23
Clcn4Q61418 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.6□□□□□ -0.23
Clcn4Q61418 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.6□□□□□ -0.23
Clcn4Q61418 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Clcn4Q61418 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Clcn4Q61418 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms