Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm7222-201ENSMUST00000117512 906 ntBASIC16.35■□□□□ 0.21
Ift88Q61371 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.35■□□□□ 0.21
Ift88Q61371 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ift88Q61371 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 Gm7787-201ENSMUST00000216858 688 ntBASIC16.35■□□□□ 0.21
Ift88Q61371 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.35■□□□□ 0.21
Ift88Q61371 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ift88Q61371 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Ift88Q61371 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ift88Q61371 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.35■□□□□ 0.21
Ift88Q61371 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ift88Q61371 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.35■□□□□ 0.21
Ift88Q61371 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.35■□□□□ 0.21
Ift88Q61371 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Ift88Q61371 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ift88Q61371 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.34■□□□□ 0.21
Ift88Q61371 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.34■□□□□ 0.21
Ift88Q61371 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Ift88Q61371 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.34■□□□□ 0.21
Ift88Q61371 Ank2-226ENSMUST00000189368 339 ntBASIC16.34■□□□□ 0.21
Ift88Q61371 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.34■□□□□ 0.21
Ift88Q61371 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.34■□□□□ 0.21
Ift88Q61371 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.34■□□□□ 0.21
Ift88Q61371 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ift88Q61371 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.34■□□□□ 0.21
Ift88Q61371 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Ift88Q61371 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Ift88Q61371 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ift88Q61371 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ift88Q61371 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ift88Q61371 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ift88Q61371 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Ift88Q61371 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ift88Q61371 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.33■□□□□ 0.2
Ift88Q61371 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ift88Q61371 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ift88Q61371 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ift88Q61371 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ift88Q61371 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ift88Q61371 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ift88Q61371 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ift88Q61371 Gm28033-201ENSMUST00000184224 96 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms