Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm38225-201ENSMUST00000194001 393 ntBASIC15.7■□□□□ 0.1
Shroom1Q5SX79 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shroom1Q5SX79 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Efs-202ENSMUST00000227037 2540 ntBASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shroom1Q5SX79 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Shroom1Q5SX79 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.67■□□□□ 0.1
Shroom1Q5SX79 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms