Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm24752-201ENSMUST00000178240 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm24496-201ENSMUST00000178287 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm25649-201ENSMUST00000178476 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm25548-201ENSMUST00000178681 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm23147-201ENSMUST00000178841 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm26095-201ENSMUST00000179270 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm22171-201ENSMUST00000179283 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm23936-201ENSMUST00000179354 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm22619-201ENSMUST00000179516 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm25255-201ENSMUST00000179579 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm24755-201ENSMUST00000179691 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm26506-201ENSMUST00000179692 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm25086-201ENSMUST00000179931 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm23243-201ENSMUST00000180047 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm24659-201ENSMUST00000180212 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm24169-201ENSMUST00000180244 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm23689-201ENSMUST00000180354 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm27359-201ENSMUST00000184153 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm27785-201ENSMUST00000184268 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm27466-201ENSMUST00000184396 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm27703-201ENSMUST00000184836 110 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps54Q5SPW0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps54Q5SPW0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps54Q5SPW0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps54Q5SPW0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Gm25287-201ENSMUST00000103846 110 ntBASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Gm22918-201ENSMUST00000103855 110 ntBASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Gm9726-201ENSMUST00000180321 678 ntBASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Gm38225-201ENSMUST00000194001 393 ntBASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps54Q5SPW0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Gm13015-201ENSMUST00000118674 204 ntBASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Gm25948-201ENSMUST00000175334 112 ntBASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Olfr286-202ENSMUST00000205305 969 ntBASIC17.69■□□□□ 0.42
Vps54Q5SPW0 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps54Q5SPW0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Mir449b-201ENSMUST00000104833 80 ntBASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.68■□□□□ 0.42
Vps54Q5SPW0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms