Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-1Q5R1I8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3-1Q5R1I8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Gm5049-201ENSMUST00000195878 1590 ntBASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Gm5921-201ENSMUST00000075898 882 ntBASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-1Q5R1I8 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-1Q5R1I8 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms