Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.93□□□□□ -0.34
Trav6-2Q5R1I4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6-2Q5R1I4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Syt7-204ENSMUST00000223586 1344 ntBASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Gm7488-201ENSMUST00000117148 684 ntBASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Gm15653-201ENSMUST00000119247 907 ntBASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Gm6222-201ENSMUST00000120787 396 ntBASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Mir1897-201ENSMUST00000122581 272 ntBASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Gm44855-201ENSMUST00000205725 362 ntBASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-2Q5R1I4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm29310-201ENSMUST00000185468 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21825-201ENSMUST00000185728 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm29109-201ENSMUST00000185895 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21896-201ENSMUST00000186520 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21873-201ENSMUST00000186728 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21794-201ENSMUST00000187056 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21880-201ENSMUST00000187275 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21826-201ENSMUST00000187451 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21198-201ENSMUST00000188393 696 ntBASIC12.9□□□□□ -0.34
Trav6-2Q5R1I4 Gm21749-201ENSMUST00000189343 696 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms