Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Gm36967-201ENSMUST00000193814 266 ntBASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav3-3Q5R1C3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Acot6-202ENSMUST00000222921 3622 ntBASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-3Q5R1C3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav3-3Q5R1C3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-3Q5R1C3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms