Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Srrm1Q52KI8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Gm5479-201ENSMUST00000160578 435 ntBASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Gm37917-201ENSMUST00000194711 392 ntBASIC16.49■□□□□ 0.23
Srrm1Q52KI8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Dupd1-202ENSMUST00000224735 548 ntBASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.49■□□□□ 0.23
Srrm1Q52KI8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Gm10766-202ENSMUST00000194123 606 ntBASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Gm6266-201ENSMUST00000203844 806 ntBASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Gm9899-201ENSMUST00000065519 555 ntBASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Srrm1Q52KI8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Srrm1Q52KI8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms