Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap2Q3V1H1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Gm13365-201ENSMUST00000121188 973 ntBASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Gm24513-201ENSMUST00000174964 138 ntBASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Gm2756-201ENSMUST00000195851 400 ntBASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ckap2Q3V1H1 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.89■□□□□ 0.3
Ckap2Q3V1H1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap2Q3V1H1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Gm18889-201ENSMUST00000174284 929 ntBASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Gm27397-201ENSMUST00000184997 107 ntBASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap2Q3V1H1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap2Q3V1H1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms