Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim80Q3V061 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim80Q3V061 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trim80Q3V061 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim80Q3V061 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trim80Q3V061 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim80Q3V061 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trim80Q3V061 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trim80Q3V061 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.27■□□□□ 0.04
Trim80Q3V061 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim80Q3V061 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trim80Q3V061 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim80Q3V061 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim80Q3V061 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim80Q3V061 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim80Q3V061 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim80Q3V061 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trim80Q3V061 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim80Q3V061 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim80Q3V061 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim80Q3V061 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim80Q3V061 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim80Q3V061 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim80Q3V061 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.26■□□□□ 0.03
Trim80Q3V061 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Gm12350-201ENSMUST00000121208 462 ntBASIC15.26■□□□□ 0.03
Trim80Q3V061 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Gm27867-201ENSMUST00000184778 125 ntBASIC15.26■□□□□ 0.03
Trim80Q3V061 Gm2213-201ENSMUST00000197485 688 ntBASIC15.26■□□□□ 0.03
Trim80Q3V061 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim80Q3V061 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim80Q3V061 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Trim80Q3V061 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim80Q3V061 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms