Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Gm12260-201ENSMUST00000122447 411 ntBASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Gm9726-201ENSMUST00000180321 678 ntBASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Gm45747-201ENSMUST00000212203 999 ntBASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkl5Q3UTQ8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkl5Q3UTQ8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkl5Q3UTQ8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkl5Q3UTQ8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Gm12134-201ENSMUST00000122109 520 ntBASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Gm17968-201ENSMUST00000194902 784 ntBASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkl5Q3UTQ8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkl5Q3UTQ8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkl5Q3UTQ8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms