Protein–RNA interactions for Protein: Q3USW4

B230104I21Rik, RIKEN cDNA B230104I21 gene, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B230104I21RikQ3USW4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Gm11439-201ENSMUST00000118598 409 ntBASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Gm8566-201ENSMUST00000120174 465 ntBASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Gm43378-201ENSMUST00000199336 582 ntBASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B230104I21RikQ3USW4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
B230104I21RikQ3USW4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
B230104I21RikQ3USW4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
B230104I21RikQ3USW4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Gm26464-201ENSMUST00000157094 305 ntBASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Gm37489-201ENSMUST00000191883 159 ntBASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Gm18473-201ENSMUST00000220543 868 ntBASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
B230104I21RikQ3USW4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Gm13047-201ENSMUST00000117116 815 ntBASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Gm12203-201ENSMUST00000118235 598 ntBASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Gm12209-201ENSMUST00000120089 596 ntBASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Gm13297-201ENSMUST00000120205 934 ntBASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Gm37230-201ENSMUST00000194491 818 ntBASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Gm10268-201ENSMUST00000085340 555 ntBASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
B230104I21RikQ3USW4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms