Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Zfp560Q3URI6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Zfp560Q3URI6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Zfp560Q3URI6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Zfp560Q3URI6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.81□□□□□ -0.04
Zfp560Q3URI6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Zfp560Q3URI6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Zfp560Q3URI6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Zfp560Q3URI6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.81□□□□□ -0.04
Zfp560Q3URI6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Zfp560Q3URI6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Zfp560Q3URI6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Efs-202ENSMUST00000227037 2540 ntBASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Gm2213-201ENSMUST00000197485 688 ntBASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Zfp560Q3URI6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.79□□□□□ -0.04
Zfp560Q3URI6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Zfp560Q3URI6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Gm25911-201ENSMUST00000157621 56 ntBASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Rpph1-201ENSMUST00000175096 319 ntBASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.78□□□□□ -0.04
Zfp560Q3URI6 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.78□□□□□ -0.04
Zfp560Q3URI6 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Zfp560Q3URI6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms