Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cks1brtQ3UNC9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Gm12008-201ENSMUST00000117791 755 ntBASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cks1brtQ3UNC9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Gm18666-201ENSMUST00000190039 958 ntBASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Gm44878-201ENSMUST00000205812 1295 ntBASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cks1brtQ3UNC9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cks1brtQ3UNC9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms