Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Brf2Q3UAW9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Brf2Q3UAW9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brf2Q3UAW9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf2Q3UAW9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf2Q3UAW9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms