Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.29■□□□□ 0.36
Col5a2Q3U962 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.29■□□□□ 0.36
Col5a2Q3U962 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.29■□□□□ 0.36
Col5a2Q3U962 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col5a2Q3U962 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Gm7287-201ENSMUST00000205267 602 ntBASIC17.28■□□□□ 0.36
Col5a2Q3U962 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.28■□□□□ 0.36
Col5a2Q3U962 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col5a2Q3U962 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.27■□□□□ 0.36
Col5a2Q3U962 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Gm5425-201ENSMUST00000214125 459 ntBASIC17.27■□□□□ 0.36
Col5a2Q3U962 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col5a2Q3U962 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.27■□□□□ 0.35
Col5a2Q3U962 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.27■□□□□ 0.35
Col5a2Q3U962 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col5a2Q3U962 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col5a2Q3U962 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Col5a2Q3U962 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col5a2Q3U962 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.27■□□□□ 0.35
Col5a2Q3U962 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.27■□□□□ 0.35
Col5a2Q3U962 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col5a2Q3U962 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col5a2Q3U962 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Gm27514-201ENSMUST00000183692 110 ntBASIC17.26■□□□□ 0.35
Col5a2Q3U962 Gm18827-201ENSMUST00000188341 790 ntBASIC17.26■□□□□ 0.35
Col5a2Q3U962 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.26■□□□□ 0.35
Col5a2Q3U962 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.26■□□□□ 0.35
Col5a2Q3U962 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.26■□□□□ 0.35
Col5a2Q3U962 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.26■□□□□ 0.35
Col5a2Q3U962 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.26■□□□□ 0.35
Col5a2Q3U962 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.26■□□□□ 0.35
Col5a2Q3U962 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col5a2Q3U962 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col5a2Q3U962 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms