Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3U1D9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Q3U1D9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.82□□□□□ -0.36
Q3U1D9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Q3U1D9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3U1D9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3U1D9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3U1D9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Q3U1D9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Q3U1D9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.81□□□□□ -0.36
Q3U1D9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.81□□□□□ -0.36
Q3U1D9 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.81□□□□□ -0.36
Q3U1D9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Q3U1D9 Gm7063-201ENSMUST00000186840 981 ntBASIC12.81□□□□□ -0.36
Q3U1D9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Q3U1D9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.81□□□□□ -0.36
Q3U1D9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.81□□□□□ -0.36
Q3U1D9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.81□□□□□ -0.36
Q3U1D9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Q3U1D9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.81□□□□□ -0.36
Q3U1D9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Q3U1D9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.8□□□□□ -0.36
Q3U1D9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Q3U1D9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Q3U1D9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Q3U1D9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
Q3U1D9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.8□□□□□ -0.36
Q3U1D9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.8□□□□□ -0.36
Q3U1D9 Gm20949-201ENSMUST00000206478 952 ntBASIC12.8□□□□□ -0.36
Q3U1D9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.8□□□□□ -0.36
Q3U1D9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.8□□□□□ -0.36
Q3U1D9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Q3U1D9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Q3U1D9 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.8□□□□□ -0.36
Q3U1D9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Q3U1D9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Q3U1D9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Q3U1D9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.79□□□□□ -0.36
Q3U1D9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Gm5479-201ENSMUST00000160578 435 ntBASIC12.79□□□□□ -0.36
Q3U1D9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.79□□□□□ -0.36
Q3U1D9 Gm25144-201ENSMUST00000179561 110 ntBASIC12.79□□□□□ -0.36
Q3U1D9 Gm25352-201ENSMUST00000179815 110 ntBASIC12.79□□□□□ -0.36
Q3U1D9 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.79□□□□□ -0.36
Q3U1D9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Q3U1D9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Q3U1D9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Q3U1D9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.79□□□□□ -0.36
Q3U1D9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Q3U1D9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Q3U1D9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Q3U1D9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Q3U1D9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Q3U1D9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms