Protein–RNA interactions for Protein: Q2NKI2

Vax1, Ventral anterior homeobox 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vax1Q2NKI2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vax1Q2NKI2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vax1Q2NKI2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vax1Q2NKI2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vax1Q2NKI2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vax1Q2NKI2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.48□□□□□ -0.25
Vax1Q2NKI2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Gm13829-201ENSMUST00000119600 138 ntBASIC13.47□□□□□ -0.25
Vax1Q2NKI2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Gm16026-204ENSMUST00000162652 683 ntBASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Gm9908-201ENSMUST00000211534 448 ntBASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.47□□□□□ -0.25
Vax1Q2NKI2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Vax1Q2NKI2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.46□□□□□ -0.25
Vax1Q2NKI2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vax1Q2NKI2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vax1Q2NKI2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vax1Q2NKI2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vax1Q2NKI2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vax1Q2NKI2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vax1Q2NKI2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vax1Q2NKI2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Gm15824-201ENSMUST00000119516 955 ntBASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Gm29667-201ENSMUST00000190817 490 ntBASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vax1Q2NKI2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.44□□□□□ -0.26
Vax1Q2NKI2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vax1Q2NKI2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms