Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn6Q03958 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.84□□□□□ -0.03
Pfdn6Q03958 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
Pfdn6Q03958 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pfdn6Q03958 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pfdn6Q03958 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pfdn6Q03958 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pfdn6Q03958 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pfdn6Q03958 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pfdn6Q03958 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn6Q03958 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.83□□□□□ -0.04
Pfdn6Q03958 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
Pfdn6Q03958 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.83□□□□□ -0.04
Pfdn6Q03958 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn6Q03958 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.83□□□□□ -0.04
Pfdn6Q03958 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.83□□□□□ -0.04
Pfdn6Q03958 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn6Q03958 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.82□□□□□ -0.04
Pfdn6Q03958 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.82□□□□□ -0.04
Pfdn6Q03958 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.82□□□□□ -0.04
Pfdn6Q03958 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Mzt1-203ENSMUST00000227948 952 ntBASIC14.82□□□□□ -0.04
Pfdn6Q03958 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.82□□□□□ -0.04
Pfdn6Q03958 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn6Q03958 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.81□□□□□ -0.04
Pfdn6Q03958 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Gm12008-201ENSMUST00000117791 755 ntBASIC14.81□□□□□ -0.04
Pfdn6Q03958 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.81□□□□□ -0.04
Pfdn6Q03958 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Gm27628-201ENSMUST00000184911 107 ntBASIC14.81□□□□□ -0.04
Pfdn6Q03958 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn6Q03958 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn6Q03958 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms