Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp11Q02853 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp11Q02853 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.36□□□□□ -0.11
Mmp11Q02853 Gm8749-201ENSMUST00000117737 331 ntBASIC14.36□□□□□ -0.11
Mmp11Q02853 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.36□□□□□ -0.11
Mmp11Q02853 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp11Q02853 Rpph1-201ENSMUST00000175096 319 ntBASIC14.36□□□□□ -0.11
Mmp11Q02853 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.36□□□□□ -0.11
Mmp11Q02853 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.36□□□□□ -0.11
Mmp11Q02853 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp11Q02853 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Mmp11Q02853 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Mmp11Q02853 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp11Q02853 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp11Q02853 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp11Q02853 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mmp11Q02853 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.36□□□□□ -0.11
Mmp11Q02853 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp11Q02853 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp11Q02853 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mmp11Q02853 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp11Q02853 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp11Q02853 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Mmp11Q02853 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Mmp11Q02853 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp11Q02853 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.35□□□□□ -0.11
Mmp11Q02853 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp11Q02853 Gm17271-201ENSMUST00000165535 355 ntBASIC14.35□□□□□ -0.11
Mmp11Q02853 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Mmp11Q02853 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp11Q02853 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Mmp11Q02853 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Mmp11Q02853 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp11Q02853 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Mmp11Q02853 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.34□□□□□ -0.11
Mmp11Q02853 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.34□□□□□ -0.11
Mmp11Q02853 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Mmp11Q02853 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Gm4995-201ENSMUST00000117247 432 ntBASIC14.34□□□□□ -0.11
Mmp11Q02853 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.34□□□□□ -0.11
Mmp11Q02853 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.34□□□□□ -0.11
Mmp11Q02853 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.34□□□□□ -0.11
Mmp11Q02853 Gm9726-201ENSMUST00000180321 678 ntBASIC14.34□□□□□ -0.11
Mmp11Q02853 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.34□□□□□ -0.11
Mmp11Q02853 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.34□□□□□ -0.11
Mmp11Q02853 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp11Q02853 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp11Q02853 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Mmp11Q02853 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.33□□□□□ -0.11
Mmp11Q02853 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.33□□□□□ -0.11
Mmp11Q02853 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp11Q02853 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp11Q02853 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp11Q02853 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp11Q02853 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp11Q02853 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Mmp11Q02853 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms