Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm23243-201ENSMUST00000180047 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm24659-201ENSMUST00000180212 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm24169-201ENSMUST00000180244 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm23689-201ENSMUST00000180354 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm27359-201ENSMUST00000184153 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm27785-201ENSMUST00000184268 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm27466-201ENSMUST00000184396 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm27703-201ENSMUST00000184836 110 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm10253-201ENSMUST00000194270 940 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gm5779-201ENSMUST00000218467 910 ntBASIC14.74□□□□□ -0.05
Col6a2Q02788 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Col6a2Q02788 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col6a2Q02788 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.74□□□□□ -0.05
Col6a2Q02788 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a2Q02788 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.73□□□□□ -0.05
Col6a2Q02788 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Gm44872-201ENSMUST00000207864 420 ntBASIC14.73□□□□□ -0.05
Col6a2Q02788 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a2Q02788 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col6a2Q02788 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.72□□□□□ -0.05
Col6a2Q02788 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.72□□□□□ -0.05
Col6a2Q02788 Gm25287-201ENSMUST00000103846 110 ntBASIC14.72□□□□□ -0.05
Col6a2Q02788 Gm22918-201ENSMUST00000103855 110 ntBASIC14.72□□□□□ -0.05
Col6a2Q02788 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.72□□□□□ -0.05
Col6a2Q02788 Gm22175-201ENSMUST00000175007 78 ntBASIC14.72□□□□□ -0.05
Col6a2Q02788 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.72□□□□□ -0.05
Col6a2Q02788 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.72□□□□□ -0.05
Col6a2Q02788 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col6a2Q02788 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.72□□□□□ -0.05
Col6a2Q02788 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Col6a2Q02788 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col6a2Q02788 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a2Q02788 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.71□□□□□ -0.05
Col6a2Q02788 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a2Q02788 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms