Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc1P97496 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.39■□□□□ 0.53
Smarcc1P97496 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc1P97496 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.39■□□□□ 0.53
Smarcc1P97496 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc1P97496 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Smarcc1P97496 Mir125a-201ENSMUST00000083545 68 ntBASIC18.39■□□□□ 0.53
Smarcc1P97496 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc1P97496 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.39■□□□□ 0.53
Smarcc1P97496 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc1P97496 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc1P97496 App-207ENSMUST00000227737 2827 ntBASIC18.39■□□□□ 0.53
Smarcc1P97496 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Smarcc1P97496 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc1P97496 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.39■□□□□ 0.53
Smarcc1P97496 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc1P97496 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.38■□□□□ 0.53
Smarcc1P97496 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.38■□□□□ 0.53
Smarcc1P97496 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Smarcc1P97496 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Smarcc1P97496 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smarcc1P97496 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.38■□□□□ 0.53
Smarcc1P97496 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.38■□□□□ 0.53
Smarcc1P97496 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.38■□□□□ 0.53
Smarcc1P97496 Gm9899-201ENSMUST00000065519 555 ntBASIC18.38■□□□□ 0.53
Smarcc1P97496 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.38■□□□□ 0.53
Smarcc1P97496 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smarcc1P97496 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc1P97496 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.37■□□□□ 0.53
Smarcc1P97496 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Smarcc1P97496 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.37■□□□□ 0.53
Smarcc1P97496 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smarcc1P97496 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smarcc1P97496 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.37■□□□□ 0.53
Smarcc1P97496 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Smarcc1P97496 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Gm17150-201ENSMUST00000165577 381 ntBASIC18.37■□□□□ 0.53
Smarcc1P97496 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.37■□□□□ 0.53
Smarcc1P97496 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Smarcc1P97496 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.37■□□□□ 0.53
Smarcc1P97496 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Smarcc1P97496 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Smarcc1P97496 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc1P97496 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Smarcc1P97496 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Gm15806-201ENSMUST00000120696 955 ntBASIC18.36■□□□□ 0.53
Smarcc1P97496 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.36■□□□□ 0.53
Smarcc1P97496 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.36■□□□□ 0.53
Smarcc1P97496 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Smarcc1P97496 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smarcc1P97496 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC18.36■□□□□ 0.53
Smarcc1P97496 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smarcc1P97496 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc1P97496 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms