Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hist1h3bP84228 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h3bP84228 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h3bP84228 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h3bP84228 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h3bP84228 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h3bP84228 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Hist1h3bP84228 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h3bP84228 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h3bP84228 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h3bP84228 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h3bP84228 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Gm18733-201ENSMUST00000173950 856 ntBASIC12.97□□□□□ -0.33
Hist1h3bP84228 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.97□□□□□ -0.33
Hist1h3bP84228 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h3bP84228 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.96□□□□□ -0.33
Hist1h3bP84228 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.96□□□□□ -0.33
Hist1h3bP84228 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.96□□□□□ -0.33
Hist1h3bP84228 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hist1h3bP84228 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h3bP84228 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h3bP84228 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h3bP84228 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h3bP84228 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Hist1h3bP84228 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h3bP84228 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h3bP84228 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h3bP84228 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.95□□□□□ -0.34
Hist1h3bP84228 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h3bP84228 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h3bP84228 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms