Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.39□□□□□ -0.43
SgcaP82350 Gm23547-201ENSMUST00000158210 271 ntBASIC12.39□□□□□ -0.43
SgcaP82350 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.39□□□□□ -0.43
SgcaP82350 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.39□□□□□ -0.43
SgcaP82350 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.39□□□□□ -0.43
SgcaP82350 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcaP82350 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcaP82350 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcaP82350 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcaP82350 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcaP82350 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SgcaP82350 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SgcaP82350 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SgcaP82350 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.39□□□□□ -0.43
SgcaP82350 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SgcaP82350 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcaP82350 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcaP82350 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SgcaP82350 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.39□□□□□ -0.43
SgcaP82350 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.39□□□□□ -0.43
SgcaP82350 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
SgcaP82350 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SgcaP82350 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.38□□□□□ -0.43
SgcaP82350 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
SgcaP82350 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SgcaP82350 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.38□□□□□ -0.43
SgcaP82350 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.38□□□□□ -0.43
SgcaP82350 Gm43799-201ENSMUST00000201845 579 ntBASIC12.38□□□□□ -0.43
SgcaP82350 Gm18101-201ENSMUST00000215769 548 ntBASIC12.38□□□□□ -0.43
SgcaP82350 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.38□□□□□ -0.43
SgcaP82350 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SgcaP82350 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SgcaP82350 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Acot6-202ENSMUST00000222921 3622 ntBASIC12.38□□□□□ -0.43
SgcaP82350 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SgcaP82350 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
SgcaP82350 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
SgcaP82350 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SgcaP82350 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SgcaP82350 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SgcaP82350 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.37□□□□□ -0.43
SgcaP82350 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.37□□□□□ -0.43
SgcaP82350 Gm6623-201ENSMUST00000173570 544 ntBASIC12.37□□□□□ -0.43
SgcaP82350 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.37□□□□□ -0.43
SgcaP82350 Gm19164-201ENSMUST00000210667 640 ntBASIC12.37□□□□□ -0.43
SgcaP82350 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SgcaP82350 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SgcaP82350 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
SgcaP82350 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SgcaP82350 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
SgcaP82350 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SgcaP82350 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SgcaP82350 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms