Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Six5P70178 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.82□□□□□ -0.2
Six5P70178 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Six5P70178 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Six5P70178 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six5P70178 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Six5P70178 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Six5P70178 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Six5P70178 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.81□□□□□ -0.2
Six5P70178 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Gm8749-201ENSMUST00000117737 331 ntBASIC13.81□□□□□ -0.2
Six5P70178 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Gm8000-201ENSMUST00000188378 592 ntBASIC13.81□□□□□ -0.2
Six5P70178 Gm44492-201ENSMUST00000197012 141 ntBASIC13.81□□□□□ -0.2
Six5P70178 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.81□□□□□ -0.2
Six5P70178 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.81□□□□□ -0.2
Six5P70178 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Six5P70178 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Six5P70178 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Six5P70178 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.81□□□□□ -0.2
Six5P70178 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Six5P70178 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.81□□□□□ -0.2
Six5P70178 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six5P70178 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Six5P70178 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Six5P70178 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Six5P70178 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Six5P70178 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.8□□□□□ -0.2
Six5P70178 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.8□□□□□ -0.2
Six5P70178 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.8□□□□□ -0.2
Six5P70178 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Six5P70178 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Six5P70178 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.8□□□□□ -0.2
Six5P70178 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Gm14494-201ENSMUST00000118786 435 ntBASIC13.8□□□□□ -0.2
Six5P70178 Gm13464-201ENSMUST00000119418 935 ntBASIC13.8□□□□□ -0.2
Six5P70178 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Six5P70178 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Six5P70178 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.8□□□□□ -0.2
Six5P70178 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.8□□□□□ -0.2
Six5P70178 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.8□□□□□ -0.2
Six5P70178 Gm27525-201ENSMUST00000184465 107 ntBASIC13.8□□□□□ -0.2
Six5P70178 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.8□□□□□ -0.2
Six5P70178 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.8□□□□□ -0.2
Six5P70178 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.8□□□□□ -0.2
Six5P70178 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.8□□□□□ -0.2
Six5P70178 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Gm10175-201ENSMUST00000086013 645 ntBASIC13.8□□□□□ -0.2
Six5P70178 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Six5P70178 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Six5P70178 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.8□□□□□ -0.2
Six5P70178 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.8□□□□□ -0.2
Six5P70178 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six5P70178 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms