Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hmgb1P63158 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.24■□□□□ 0.19
Hmgb1P63158 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.24■□□□□ 0.19
Hmgb1P63158 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.24■□□□□ 0.19
Hmgb1P63158 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.24■□□□□ 0.19
Hmgb1P63158 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.24■□□□□ 0.19
Hmgb1P63158 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.24■□□□□ 0.19
Hmgb1P63158 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.24■□□□□ 0.19
Hmgb1P63158 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgb1P63158 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Hmgb1P63158 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Hmgb1P63158 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hmgb1P63158 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hmgb1P63158 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.23■□□□□ 0.19
Hmgb1P63158 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.23■□□□□ 0.19
Hmgb1P63158 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Gm13036-201ENSMUST00000117799 748 ntBASIC16.23■□□□□ 0.19
Hmgb1P63158 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.23■□□□□ 0.19
Hmgb1P63158 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.23■□□□□ 0.19
Hmgb1P63158 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.23■□□□□ 0.19
Hmgb1P63158 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.23■□□□□ 0.19
Hmgb1P63158 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
Hmgb1P63158 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Hmgb1P63158 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.23■□□□□ 0.19
Hmgb1P63158 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.23■□□□□ 0.19
Hmgb1P63158 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hmgb1P63158 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgb1P63158 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Gm28659-201ENSMUST00000188013 759 ntBASIC16.22■□□□□ 0.19
Hmgb1P63158 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.22■□□□□ 0.19
Hmgb1P63158 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.22■□□□□ 0.19
Hmgb1P63158 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Hmgb1P63158 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgb1P63158 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgb1P63158 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hmgb1P63158 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgb1P63158 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.21■□□□□ 0.19
Hmgb1P63158 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgb1P63158 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Hmgb1P63158 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgb1P63158 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgb1P63158 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgb1P63158 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms