Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lsm6P62313 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm6P62313 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm6P62313 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.94□□□□□ -0.34
Lsm6P62313 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lsm6P62313 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.94□□□□□ -0.34
Lsm6P62313 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.94□□□□□ -0.34
Lsm6P62313 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lsm6P62313 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Thap2-203ENSMUST00000218989 527 ntBASIC12.94□□□□□ -0.34
Lsm6P62313 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.94□□□□□ -0.34
Lsm6P62313 Gm10154-201ENSMUST00000084445 354 ntBASIC12.94□□□□□ -0.34
Lsm6P62313 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.94□□□□□ -0.34
Lsm6P62313 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Lsm6P62313 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.94□□□□□ -0.34
Lsm6P62313 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lsm6P62313 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lsm6P62313 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.93□□□□□ -0.34
Lsm6P62313 Carlr-201ENSMUST00000181515 2574 ntBASIC12.93□□□□□ -0.34
Lsm6P62313 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Gm13464-201ENSMUST00000119418 935 ntBASIC12.93□□□□□ -0.34
Lsm6P62313 Gm1401-201ENSMUST00000122048 772 ntBASIC12.93□□□□□ -0.34
Lsm6P62313 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.93□□□□□ -0.34
Lsm6P62313 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Gm5177-201ENSMUST00000183092 997 ntBASIC12.93□□□□□ -0.34
Lsm6P62313 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.93□□□□□ -0.34
Lsm6P62313 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.93□□□□□ -0.34
Lsm6P62313 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Lsm6P62313 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Lsm6P62313 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm6P62313 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.92□□□□□ -0.34
Lsm6P62313 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Lsm6P62313 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.92□□□□□ -0.34
Lsm6P62313 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.92□□□□□ -0.34
Lsm6P62313 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Lsm6P62313 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Gm16198-201ENSMUST00000118766 670 ntBASIC12.92□□□□□ -0.34
Lsm6P62313 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lsm6P62313 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm6P62313 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms