Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Nphp4P59240 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.83■□□□□ 0.76
Nphp4P59240 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC19.83■□□□□ 0.76
Nphp4P59240 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nphp4P59240 Gm5745-201ENSMUST00000183748 313 ntBASIC19.83■□□□□ 0.76
Nphp4P59240 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC19.83■□□□□ 0.76
Nphp4P59240 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nphp4P59240 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Nphp4P59240 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Nphp4P59240 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Nphp4P59240 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nphp4P59240 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.82■□□□□ 0.76
Nphp4P59240 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nphp4P59240 Gm12585-201ENSMUST00000117307 290 ntBASIC19.82■□□□□ 0.76
Nphp4P59240 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nphp4P59240 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.82■□□□□ 0.76
Nphp4P59240 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nphp4P59240 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nphp4P59240 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nphp4P59240 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nphp4P59240 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nphp4P59240 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nphp4P59240 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nphp4P59240 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nphp4P59240 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Nphp4P59240 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.81■□□□□ 0.76
Nphp4P59240 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC19.81■□□□□ 0.76
Nphp4P59240 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nphp4P59240 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC19.81■□□□□ 0.76
Nphp4P59240 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Nphp4P59240 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Nphp4P59240 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC19.81■□□□□ 0.76
Nphp4P59240 AC153872.1-201ENSMUST00000199539 128 ntBASIC19.81■□□□□ 0.76
Nphp4P59240 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nphp4P59240 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nphp4P59240 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nphp4P59240 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nphp4P59240 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nphp4P59240 Gm10584-201ENSMUST00000207036 2628 ntBASIC19.8■□□□□ 0.76
Nphp4P59240 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nphp4P59240 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nphp4P59240 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nphp4P59240 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC19.8■□□□□ 0.76
Nphp4P59240 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC19.8■□□□□ 0.76
Nphp4P59240 Gm10766-202ENSMUST00000194123 606 ntBASIC19.8■□□□□ 0.76
Nphp4P59240 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nphp4P59240 Gm9797-201ENSMUST00000052902 613 ntBASIC19.8■□□□□ 0.76
Nphp4P59240 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nphp4P59240 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nphp4P59240 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nphp4P59240 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nphp4P59240 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nphp4P59240 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nphp4P59240 Efs-202ENSMUST00000227037 2540 ntBASIC19.8■□□□□ 0.76
Nphp4P59240 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nphp4P59240 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC19.8■□□□□ 0.76
Nphp4P59240 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nphp4P59240 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nphp4P59240 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nphp4P59240 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nphp4P59240 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nphp4P59240 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nphp4P59240 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nphp4P59240 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nphp4P59240 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC19.79■□□□□ 0.76
Nphp4P59240 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC19.79■□□□□ 0.76
Nphp4P59240 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nphp4P59240 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nphp4P59240 Ighv1-25-201ENSMUST00000195638 345 ntBASIC19.79■□□□□ 0.76
Nphp4P59240 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC19.79■□□□□ 0.76
Nphp4P59240 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.79■□□□□ 0.76
Nphp4P59240 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nphp4P59240 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nphp4P59240 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nphp4P59240 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Nphp4P59240 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nphp4P59240 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nphp4P59240 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Nphp4P59240 Gm12490-201ENSMUST00000120255 560 ntBASIC19.78■□□□□ 0.76
Nphp4P59240 Gm15393-201ENSMUST00000120499 219 ntBASIC19.78■□□□□ 0.76
Nphp4P59240 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.78■□□□□ 0.76
Nphp4P59240 Gm44608-201ENSMUST00000206827 855 ntBASIC19.78■□□□□ 0.76
Nphp4P59240 Gm7653-201ENSMUST00000214567 508 ntBASIC19.78■□□□□ 0.76
Nphp4P59240 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms