Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm2P58774 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tpm2P58774 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.97■□□□□ 0.31
Tpm2P58774 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Tpm2P58774 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Tpm2P58774 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tpm2P58774 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Gm14722-201ENSMUST00000118943 689 ntBASIC16.97■□□□□ 0.31
Tpm2P58774 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Tpm2P58774 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.97■□□□□ 0.31
Tpm2P58774 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Tpm2P58774 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tpm2P58774 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.97■□□□□ 0.31
Tpm2P58774 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Tpm2P58774 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tpm2P58774 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Tpm2P58774 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Tpm2P58774 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Tpm2P58774 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tpm2P58774 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Tpm2P58774 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
Tpm2P58774 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Tpm2P58774 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Tpm2P58774 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.96■□□□□ 0.31
Tpm2P58774 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.96■□□□□ 0.31
Tpm2P58774 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tpm2P58774 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Tpm2P58774 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.96■□□□□ 0.3
Tpm2P58774 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tpm2P58774 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Tpm2P58774 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.95■□□□□ 0.3
Tpm2P58774 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Tpm2P58774 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm2P58774 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.94■□□□□ 0.3
Tpm2P58774 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.94■□□□□ 0.3
Tpm2P58774 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm2P58774 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.94■□□□□ 0.3
Tpm2P58774 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm2P58774 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm2P58774 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Tpm2P58774 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Tpm2P58774 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm2P58774 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm2P58774 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm2P58774 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.94■□□□□ 0.3
Tpm2P58774 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm2P58774 Gm6659-201ENSMUST00000174752 547 ntBASIC16.94■□□□□ 0.3
Tpm2P58774 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.94■□□□□ 0.3
Tpm2P58774 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm2P58774 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Tpm2P58774 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms