Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CckbrP56481 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CckbrP56481 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CckbrP56481 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CckbrP56481 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CckbrP56481 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CckbrP56481 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CckbrP56481 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.68□□□□□ -0.22
CckbrP56481 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CckbrP56481 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CckbrP56481 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CckbrP56481 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CckbrP56481 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CckbrP56481 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CckbrP56481 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.68□□□□□ -0.22
CckbrP56481 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CckbrP56481 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.67□□□□□ -0.22
CckbrP56481 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.67□□□□□ -0.22
CckbrP56481 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
CckbrP56481 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.67□□□□□ -0.22
CckbrP56481 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.67□□□□□ -0.22
CckbrP56481 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CckbrP56481 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CckbrP56481 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CckbrP56481 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CckbrP56481 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CckbrP56481 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CckbrP56481 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CckbrP56481 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CckbrP56481 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CckbrP56481 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CckbrP56481 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.66□□□□□ -0.22
CckbrP56481 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.66□□□□□ -0.22
CckbrP56481 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.66□□□□□ -0.22
CckbrP56481 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.66□□□□□ -0.22
CckbrP56481 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.66□□□□□ -0.22
CckbrP56481 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.66□□□□□ -0.22
CckbrP56481 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.66□□□□□ -0.22
CckbrP56481 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.66□□□□□ -0.22
CckbrP56481 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CckbrP56481 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.66□□□□□ -0.22
CckbrP56481 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CckbrP56481 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CckbrP56481 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CckbrP56481 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CckbrP56481 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CckbrP56481 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CckbrP56481 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CckbrP56481 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CckbrP56481 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CckbrP56481 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CckbrP56481 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CckbrP56481 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms