Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.21□□□□□ -0.29
Abcd3P55096 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Abcd3P55096 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Abcd3P55096 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Abcd3P55096 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Abcd3P55096 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abcd3P55096 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Abcd3P55096 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.21□□□□□ -0.3
Abcd3P55096 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.21□□□□□ -0.3
Abcd3P55096 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.21□□□□□ -0.3
Abcd3P55096 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Abcd3P55096 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.2□□□□□ -0.3
Abcd3P55096 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Abcd3P55096 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.2□□□□□ -0.3
Abcd3P55096 Gm13464-201ENSMUST00000119418 935 ntBASIC13.2□□□□□ -0.3
Abcd3P55096 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Abcd3P55096 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.2□□□□□ -0.3
Abcd3P55096 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.2□□□□□ -0.3
Abcd3P55096 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.2□□□□□ -0.3
Abcd3P55096 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Gm5867-201ENSMUST00000063197 592 ntBASIC13.2□□□□□ -0.3
Abcd3P55096 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Abcd3P55096 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Abcd3P55096 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Abcd3P55096 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Abcd3P55096 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
Abcd3P55096 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Abcd3P55096 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.19□□□□□ -0.3
Abcd3P55096 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Abcd3P55096 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Abcd3P55096 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Abcd3P55096 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Abcd3P55096 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.19□□□□□ -0.3
Abcd3P55096 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Abcd3P55096 Gm8749-201ENSMUST00000117737 331 ntBASIC13.19□□□□□ -0.3
Abcd3P55096 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.19□□□□□ -0.3
Abcd3P55096 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.19□□□□□ -0.3
Abcd3P55096 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.19□□□□□ -0.3
Abcd3P55096 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.19□□□□□ -0.3
Abcd3P55096 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.19□□□□□ -0.3
Abcd3P55096 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.19□□□□□ -0.3
Abcd3P55096 Thap2-203ENSMUST00000218989 527 ntBASIC13.19□□□□□ -0.3
Abcd3P55096 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.19□□□□□ -0.3
Abcd3P55096 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.19□□□□□ -0.3
Abcd3P55096 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Abcd3P55096 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Abcd3P55096 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd3P55096 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd3P55096 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.18□□□□□ -0.3
Abcd3P55096 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Abcd3P55096 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd3P55096 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd3P55096 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abcd3P55096 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.18□□□□□ -0.3
Abcd3P55096 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.18□□□□□ -0.3
Abcd3P55096 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms