Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Msh6P54276 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Msh6P54276 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.6■□□□□ 0.57
Msh6P54276 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.6■□□□□ 0.57
Msh6P54276 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.6■□□□□ 0.57
Msh6P54276 Gm18018-201ENSMUST00000198273 408 ntBASIC18.6■□□□□ 0.57
Msh6P54276 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.6■□□□□ 0.57
Msh6P54276 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Msh6P54276 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Msh6P54276 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Msh6P54276 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Msh6P54276 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.6■□□□□ 0.57
Msh6P54276 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.6■□□□□ 0.57
Msh6P54276 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh6P54276 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.59■□□□□ 0.57
Msh6P54276 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.59■□□□□ 0.57
Msh6P54276 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.59■□□□□ 0.57
Msh6P54276 Gm45384-201ENSMUST00000210451 277 ntBASIC18.59■□□□□ 0.57
Msh6P54276 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.59■□□□□ 0.57
Msh6P54276 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Msh6P54276 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Msh6P54276 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.59■□□□□ 0.57
Msh6P54276 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.59■□□□□ 0.57
Msh6P54276 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC18.59■□□□□ 0.57
Msh6P54276 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Msh6P54276 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh6P54276 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.58■□□□□ 0.57
Msh6P54276 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Msh6P54276 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh6P54276 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh6P54276 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh6P54276 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh6P54276 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.58■□□□□ 0.57
Msh6P54276 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh6P54276 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Msh6P54276 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.58■□□□□ 0.57
Msh6P54276 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh6P54276 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.58■□□□□ 0.57
Msh6P54276 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh6P54276 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.58■□□□□ 0.57
Msh6P54276 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Msh6P54276 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh6P54276 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh6P54276 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh6P54276 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh6P54276 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh6P54276 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Msh6P54276 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Msh6P54276 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Msh6P54276 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Msh6P54276 Gm6222-201ENSMUST00000120787 396 ntBASIC18.57■□□□□ 0.56
Msh6P54276 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.57■□□□□ 0.56
Msh6P54276 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.57■□□□□ 0.56
Msh6P54276 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.57■□□□□ 0.56
Msh6P54276 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.57■□□□□ 0.56
Msh6P54276 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.57■□□□□ 0.56
Msh6P54276 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.57■□□□□ 0.56
Msh6P54276 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh6P54276 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.56■□□□□ 0.56
Msh6P54276 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms