Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.76□□□□□ -0.05
Fdft1P53798 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.76□□□□□ -0.05
Fdft1P53798 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Fdft1P53798 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Fdft1P53798 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fdft1P53798 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.76□□□□□ -0.05
Fdft1P53798 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.75□□□□□ -0.05
Fdft1P53798 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.75□□□□□ -0.05
Fdft1P53798 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.75□□□□□ -0.05
Fdft1P53798 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.75□□□□□ -0.05
Fdft1P53798 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Fdft1P53798 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Fdft1P53798 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Fdft1P53798 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.75□□□□□ -0.05
Fdft1P53798 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Mir5126-201ENSMUST00000175513 77 ntBASIC14.75□□□□□ -0.05
Fdft1P53798 Gm27741-201ENSMUST00000185060 237 ntBASIC14.75□□□□□ -0.05
Fdft1P53798 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.75□□□□□ -0.05
Fdft1P53798 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.75□□□□□ -0.05
Fdft1P53798 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Gm18246-201ENSMUST00000221023 728 ntBASIC14.75□□□□□ -0.05
Fdft1P53798 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Fdft1P53798 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Fdft1P53798 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.75□□□□□ -0.05
Fdft1P53798 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fdft1P53798 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.74□□□□□ -0.05
Fdft1P53798 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Fdft1P53798 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.74□□□□□ -0.05
Fdft1P53798 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Gm7461-201ENSMUST00000058918 827 ntBASIC14.74□□□□□ -0.05
Fdft1P53798 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Fdft1P53798 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.74□□□□□ -0.05
Fdft1P53798 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Fdft1P53798 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.74□□□□□ -0.05
Fdft1P53798 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Fdft1P53798 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fdft1P53798 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Fdft1P53798 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms