Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lbx1P52955 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lbx1P52955 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Gm12384-201ENSMUST00000119228 919 ntBASIC14.22□□□□□ -0.13
Lbx1P52955 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.22□□□□□ -0.13
Lbx1P52955 Gm27514-201ENSMUST00000183692 110 ntBASIC14.22□□□□□ -0.13
Lbx1P52955 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.22□□□□□ -0.13
Lbx1P52955 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lbx1P52955 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.22□□□□□ -0.13
Lbx1P52955 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lbx1P52955 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lbx1P52955 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Lbx1P52955 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lbx1P52955 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lbx1P52955 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lbx1P52955 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.21□□□□□ -0.13
Lbx1P52955 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.21□□□□□ -0.13
Lbx1P52955 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lbx1P52955 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lbx1P52955 Gm12997-201ENSMUST00000120207 640 ntBASIC14.21□□□□□ -0.13
Lbx1P52955 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.21□□□□□ -0.13
Lbx1P52955 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Gm37986-201ENSMUST00000193285 383 ntBASIC14.21□□□□□ -0.13
Lbx1P52955 Rps4l-202ENSMUST00000204242 789 ntBASIC14.21□□□□□ -0.13
Lbx1P52955 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.21□□□□□ -0.13
Lbx1P52955 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Lbx1P52955 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lbx1P52955 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lbx1P52955 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lbx1P52955 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lbx1P52955 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lbx1P52955 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lbx1P52955 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.21□□□□□ -0.14
Lbx1P52955 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.21□□□□□ -0.14
Lbx1P52955 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Lbx1P52955 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lbx1P52955 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.2□□□□□ -0.14
Lbx1P52955 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.2□□□□□ -0.14
Lbx1P52955 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Lbx1P52955 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.2□□□□□ -0.14
Lbx1P52955 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.2□□□□□ -0.14
Lbx1P52955 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lbx1P52955 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.2□□□□□ -0.14
Lbx1P52955 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Lbx1P52955 Gm43758-201ENSMUST00000199500 367 ntBASIC14.2□□□□□ -0.14
Lbx1P52955 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Lbx1P52955 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.2□□□□□ -0.14
Lbx1P52955 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Lbx1P52955 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.2□□□□□ -0.14
Lbx1P52955 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lbx1P52955 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lbx1P52955 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms