Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SftpbP50405 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SftpbP50405 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Gm25990-201ENSMUST00000102440 86 ntBASIC15.13■□□□□ 0.01
SftpbP50405 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SftpbP50405 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.13■□□□□ 0.01
SftpbP50405 Gm7977-201ENSMUST00000193787 748 ntBASIC15.13■□□□□ 0.01
SftpbP50405 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.13■□□□□ 0.01
SftpbP50405 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.13■□□□□ 0.01
SftpbP50405 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.13■□□□□ 0.01
SftpbP50405 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.13■□□□□ 0.01
SftpbP50405 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.13■□□□□ 0.01
SftpbP50405 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SftpbP50405 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SftpbP50405 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SftpbP50405 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SftpbP50405 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SftpbP50405 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SftpbP50405 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.12■□□□□ 0.01
SftpbP50405 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.12■□□□□ 0.01
SftpbP50405 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SftpbP50405 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.12■□□□□ 0.01
SftpbP50405 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SftpbP50405 Gm34391-201ENSMUST00000203706 907 ntBASIC15.12■□□□□ 0.01
SftpbP50405 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SftpbP50405 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.12■□□□□ 0.01
SftpbP50405 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SftpbP50405 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SftpbP50405 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SftpbP50405 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.12■□□□□ 0.01
SftpbP50405 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.12■□□□□ 0.01
SftpbP50405 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SftpbP50405 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SftpbP50405 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.11■□□□□ 0.01
SftpbP50405 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Gm21362-201ENSMUST00000194272 928 ntBASIC15.11■□□□□ 0.01
SftpbP50405 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SftpbP50405 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.11■□□□□ 0.01
SftpbP50405 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.11■□□□□ 0.01
SftpbP50405 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SftpbP50405 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SftpbP50405 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.1■□□□□ 0.01
SftpbP50405 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.1■□□□□ 0.01
SftpbP50405 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.1■□□□□ 0.01
SftpbP50405 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Birc2-201ENSMUST00000054878 378 ntBASIC15.1■□□□□ 0.01
SftpbP50405 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SftpbP50405 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
SftpbP50405 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SftpbP50405 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms