Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.26□□□□□ -0.45
Nkx2-1P50220 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-1P50220 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Gm8344-201ENSMUST00000119813 856 ntBASIC12.25□□□□□ -0.45
Nkx2-1P50220 Gm15794-201ENSMUST00000120182 631 ntBASIC12.25□□□□□ -0.45
Nkx2-1P50220 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.25□□□□□ -0.45
Nkx2-1P50220 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-1P50220 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Rprl3-201ENSMUST00000157400 290 ntBASIC12.24□□□□□ -0.45
Nkx2-1P50220 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.24□□□□□ -0.45
Nkx2-1P50220 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-1P50220 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms