Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hnf4aP49698 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hnf4aP49698 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hnf4aP49698 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hnf4aP49698 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.31□□□□□ -0.12
Hnf4aP49698 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hnf4aP49698 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hnf4aP49698 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hnf4aP49698 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hnf4aP49698 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hnf4aP49698 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hnf4aP49698 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hnf4aP49698 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hnf4aP49698 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hnf4aP49698 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.3□□□□□ -0.12
Hnf4aP49698 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.3□□□□□ -0.12
Hnf4aP49698 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hnf4aP49698 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.3□□□□□ -0.12
Hnf4aP49698 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hnf4aP49698 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.3□□□□□ -0.12
Hnf4aP49698 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Gm2272-201ENSMUST00000194903 582 ntBASIC14.29□□□□□ -0.12
Hnf4aP49698 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.29□□□□□ -0.12
Hnf4aP49698 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hnf4aP49698 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hnf4aP49698 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hnf4aP49698 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Hnf4aP49698 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hnf4aP49698 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hnf4aP49698 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hnf4aP49698 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.28□□□□□ -0.12
Hnf4aP49698 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.28□□□□□ -0.12
Hnf4aP49698 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hnf4aP49698 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hnf4aP49698 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hnf4aP49698 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hnf4aP49698 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.28□□□□□ -0.12
Hnf4aP49698 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.28□□□□□ -0.12
Hnf4aP49698 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.28□□□□□ -0.12
Hnf4aP49698 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hnf4aP49698 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.28□□□□□ -0.12
Hnf4aP49698 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hnf4aP49698 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hnf4aP49698 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.28□□□□□ -0.12
Hnf4aP49698 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.28□□□□□ -0.12
Hnf4aP49698 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms