Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.34□□□□□ -0.27
Rfx3P48381 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rfx3P48381 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.34□□□□□ -0.27
Rfx3P48381 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Gm11452-201ENSMUST00000122376 690 ntBASIC13.34□□□□□ -0.27
Rfx3P48381 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Rfx3P48381 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rfx3P48381 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.34□□□□□ -0.27
Rfx3P48381 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Rfx3P48381 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
Rfx3P48381 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfx3P48381 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Rfx3P48381 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rfx3P48381 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rfx3P48381 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx3P48381 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rfx3P48381 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rfx3P48381 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rfx3P48381 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rfx3P48381 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rfx3P48381 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rfx3P48381 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfx3P48381 Gm7862-201ENSMUST00000121461 292 ntBASIC13.33□□□□□ -0.28
Rfx3P48381 Gm15173-201ENSMUST00000122049 433 ntBASIC13.33□□□□□ -0.28
Rfx3P48381 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.33□□□□□ -0.28
Rfx3P48381 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Rfx3P48381 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rfx3P48381 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfx3P48381 Gm7230-201ENSMUST00000173026 815 ntBASIC13.33□□□□□ -0.28
Rfx3P48381 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfx3P48381 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.33□□□□□ -0.28
Rfx3P48381 Gm28659-201ENSMUST00000188013 759 ntBASIC13.33□□□□□ -0.28
Rfx3P48381 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.33□□□□□ -0.28
Rfx3P48381 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Gm7787-201ENSMUST00000216858 688 ntBASIC13.33□□□□□ -0.28
Rfx3P48381 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rfx3P48381 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.33□□□□□ -0.28
Rfx3P48381 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx3P48381 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rfx3P48381 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.32□□□□□ -0.28
Rfx3P48381 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.32□□□□□ -0.28
Rfx3P48381 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.32□□□□□ -0.28
Rfx3P48381 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.32□□□□□ -0.28
Rfx3P48381 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rfx3P48381 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.32□□□□□ -0.28
Rfx3P48381 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.32□□□□□ -0.28
Rfx3P48381 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms